STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
E0W164_PEDHCProtein transport protein Sec24B, putative. (1158 aa)    
Predicted Functional Partners:
E0VYI1_PEDHC
Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.
   
 0.999
E0VSJ7_PEDHC
Protein transport protein sec13, putative; Belongs to the WD repeat SEC13 family.
   
 0.998
E0W358_PEDHC
Protein transport protein Sec24A, putative.
   
0.998
E0VNA3_PEDHC
WD_REPEATS_REGION domain-containing protein.
   
 0.992
E0VLX2_PEDHC
Sec16_C domain-containing protein.
   
 0.977
E0W2R7_PEDHC
GTP-binding protein SAR1B, putative; Belongs to the small GTPase superfamily. SAR1 family.
     
 0.896
E0VN45_PEDHC
Ankyrin repeat-containing protein, putative.
   
 0.851
E0VTR7_PEDHC
Prolactin regulatory element-binding protein, putative.
   
 0.828
E0VP35_PEDHC
Syntaxin-5, putative.
    
 0.825
E0VU48_PEDHC
Dp115 protein, putative.
   
 
 0.785
Your Current Organism:
Pediculus humanus
NCBI taxonomy Id: 121224
Other names: P. humanus corporis, Pediculus humanus corporis, Pediculus humanus humanus, human body lice, human body louse
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