STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALV40622.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (1131 aa)    
Predicted Functional Partners:
alaS
alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain.
  
 0.862
ALV41690.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.852
ALV43372.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.791
ALV44026.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.784
ALV43830.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.779
ALV42381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.773
ALV42217.1
Acetoin utilization protein AcuC; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.769
ALV41780.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.759
ALV40109.1
Glycosyl transferase family 9; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.752
ALV40235.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.752
Your Current Organism:
Pseudarthrobacter sulfonivorans
NCBI taxonomy Id: 121292
Other names: ATCC BAA-112, Arthrobacter sp. ALL, Arthrobacter sulfonivorans, Arthrobacter sulfonivorans Borodina et al. 2002, DSM 14002, JCM 13520, P. sulfonivorans, Pseudarthrobacter sulfonivorans (Borodina et al. 2002) Busse 2016, strain ALL
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