STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FFI9Putative upf0392 protein. (166 aa)    
Predicted Functional Partners:
A0A0G2FEF6
Putative nedd8-like protein.
    
  0.664
A0A0G2FGA0
Putative ubiquitin-40s ribosomal protein s31 fusion protein.
    
  0.664
A0A0G2HJF0
Putative cia30 family protein.
    
  0.664
A0A0G2FBI2
Putative family decarboxylase.
    
 0.651
A0A0G2FI39
Putative nedd8-activating enzyme e1 catalytic subunit.
    
  0.627
A0A0G2F969
Putative an1-type zinc finger protein.
    
  0.622
A0A0G2FG11
Putative ubiquitin-conjugating enzyme e2 variant 1; Belongs to the complex I LYR family.
     
 0.622
A0A0G2FI88
Putative 60s ribosomal protein l40.
    
  0.622
A0A0G2FJ44
Putative ubiquitin.
    
  0.622
A0A0G2FHY7
Putative cullulin 3; Belongs to the cullin family.
    
 0.621
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.