STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0G2FPD6Uncharacterized protein. (281 aa)    
Predicted Functional Partners:
A0A0G2F591
Putative 60s ribosomal protein l21.
   
   0.673
A0A0G2FV94
Putative ankyrin repeat protein nuc-2.
    
 0.665
A0A0G2FR89
Putative glycerophosphodiester phosphodiesterase gde1.
    
  0.645
A0A0G2IEY5
Putative mitochondrial 54s ribosomal protein rml2.
   
 
 0.612
A0A0G2H2M1
Putative 60s ribosomal protein l16; Belongs to the universal ribosomal protein uL13 family.
   
   0.602
A0A0G2HTV5
ANK_REP_REGION domain-containing protein.
    
 0.590
A0A0G2FH71
Putative 60s ribosomal protein l2.
   
 
 0.586
A0A0G2HH62
Putative mitochondrial import receptor subunit tom-40.
    
 0.572
A0A0G2HTR3
Putative mitochondrial 54s ribosomal protein 23; Belongs to the universal ribosomal protein uL13 family.
   
   0.570
A0A0G2FFC7
Putative 26s proteasome regulatory subunit rpn11.
    
  0.554
Your Current Organism:
Diaporthe ampelina
NCBI taxonomy Id: 1214573
Other names: CBS 114016, D. ampelina, Diaporthe ampelina (Berk. & M.A. Curtis) R.R. Gomes, C. Glienke & Crous, Diaporthe neoviticola, Diaporthe sp. DU-2012e, Fusicoccum viticolum, Phoma ampelina, Phoma viticola, Phomopsis ampelina, Phomopsis sp. Pho06, Phomopsis sp. Pho07, Phomopsis sp. Pho10, Phomopsis sp. Pho16, Phomopsis sp. Pho18, Phomopsis sp. Pho24, Phomopsis sp. Pho25, Phomopsis sp. Pho26, Phomopsis sp. Pho28, Phomopsis sp. Pho32, Phomopsis sp. PhoCT1L, Phomopsis sp. taxon 2, Phomopsis viticola, STEU 2660
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.