STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGA64207.1Ribonuclease BN. (281 aa)    
Predicted Functional Partners:
AGA65293.1
Hypothetical protein.
 
     0.661
AGA64157.1
Hypothetical protein.
  
     0.649
AGA64564.1
Outer membrane protein.
  
     0.528
AGA65084.1
Putative transmemrbane protein.
  
     0.526
AGA64756.1
Hypothetical protein.
  
     0.516
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
     
 0.507
AGA64122.1
Glycosyltransferase.
  
   
 0.495
AGA64614.1
Hypothetical protein.
  
     0.444
AGA64892.1
Omp25.
  
     0.444
AGA65164.1
Hypothetical protein.
  
     0.423
Your Current Organism:
Liberibacter crescens
NCBI taxonomy Id: 1215343
Other names: L. crescens BT-1, Liberibacter crescens BT-1, Liberibacter sp. BT-1, bacterium BT-1
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