STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LY56_02853Unannotated protein. (263 aa)    
Predicted Functional Partners:
LY56_02852
Unannotated protein.
 
 0.999
LY56_01013
Unannotated protein.
 
 
 0.999
fliP
Unannotated protein; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
 
 
 0.999
flhA
Unannotated protein; Required for formation of the rod structure of the flagellar apparatus. Together with FliI and FliH, may constitute the export apparatus of flagellin; Belongs to the FHIPEP (flagella/HR/invasion proteins export pore) family.
 
  
 0.995
LY56_01012
Unannotated protein.
 
 
 0.992
LY56_01010
Unannotated protein; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
 
 
 0.990
LY56_00791
Unannotated protein; The M ring may be actively involved in energy transduction. Belongs to the FliF family.
 
 
 0.985
LY56_00793
Unannotated protein.
 
 
 0.982
LY56_00790
Unannotated protein; Controls the rotational direction of flagella during chemotaxis; Belongs to the FliL family.
 
  
 0.976
LY56_00515
Unannotated protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
 
 0.975
Your Current Organism:
Roseinatronobacter thiooxidans
NCBI taxonomy Id: 121821
Other names: DSM 13087, R. thiooxidans, Roseinatronobacter thiooxidans Sorokin et al. 2000, strain ALG 1
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