STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
JF74_14960Hypothetical protein. (356 aa)    
Predicted Functional Partners:
JF74_12310
PTS Glc IIBC.
 
  
 0.926
JF74_00900
PTS Glc IIABC.
    
 0.916
JF74_01230
PTS Glc IIABC.
    
 0.916
JF74_04240
PTS Glc IIABC.
    
 0.916
JF74_05870
PTS Glc IIA.
    
 0.916
JF74_12570
PTS Glc IIABC.
    
 0.916
JF74_15440
PTS Glc IIABC.
    
 0.916
JF74_17160
PTS Glc IIABC.
    
 0.916
JF74_14970
SIS sugar isomerase domain protein; Catalyzes the conversion of a range of fructosamine 6- phosphates to glucose 6-phosphate and a free amino acid.
 
 
 0.892
JF74_14940
PTS Man IIB.
 
  
 0.819
Your Current Organism:
Lactobacillus melliventris
NCBI taxonomy Id: 1218507
Other names: CCUG 63629, DSM 26256, L. melliventris, Lactobacillus melliventris Olofsson et al. 2014, Lactobacillus sp. ESL0184, Lactobacillus sp. Hma8, Lactobacillus sp. Hma8N, strain Hma8N
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.