STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001598435_03977Unannotated protein. (302 aa)    
Predicted Functional Partners:
GCA_001598435_00358
Unannotated protein.
    
 0.992
GCA_001598435_02354
Unannotated protein.
 
 0.992
GCA_001598435_00192
Unannotated protein.
   
  0.991
GCA_001598435_01296
Unannotated protein.
    
 0.991
GCA_001598435_01293
Unannotated protein.
  
 0.985
GCA_001598435_01275
Unannotated protein.
   
 0.981
GCA_001598435_03481
Unannotated protein.
   
 0.978
GCA_001598435_01297
Unannotated protein.
    
 0.967
GCA_001598435_00553
Unannotated protein.
  
 
 
 0.960
GCA_001598435_01279
Unannotated protein.
    
 0.958
Your Current Organism:
Sphingomonas pituitosa
NCBI taxonomy Id: 1219051
Other names: S. pituitosa NBRC 102491, Sphingomonas pituitosa NBRC 102491
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.