STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ALA1Alanine--tRNA ligase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged tRNA(Ala) via its editing domain. Belongs to the class-II aminoacyl-tRNA synthetase family. (963 aa)    
Predicted Functional Partners:
W2RJM7_9EURO
Uncharacterized protein.
   
 0.934
W2SCF6_9EURO
Uncharacterized protein.
   
 0.932
W2S5S0_9EURO
ANAPC5 domain-containing protein.
   
 0.930
W2S032_9EURO
Uncharacterized protein.
    
 0.929
W2S7D2_9EURO
DOC domain-containing protein.
    
 0.929
W2RS39_9EURO
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.928
W2SCJ7_9EURO
Uncharacterized protein.
    
 0.907
W2RVN1_9EURO
Glycine-tRNA ligase.
  
 
 0.889
W2RNT9_9EURO
Uncharacterized protein.
    
 0.864
W2RP01_9EURO
RING-type domain-containing protein.
    
 0.864
Your Current Organism:
Cyphellophora europaea
NCBI taxonomy Id: 1220924
Other names: C. europaea CBS 101466, Cyphellophora europaea CBS 101466, Phialophora europaea CBS 101466
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