STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001552855_01076Unannotated protein. (332 aa)    
Predicted Functional Partners:
GCA_001552855_00376
Unannotated protein.
  
  
  0.830
GCA_001552855_03700
Unannotated protein.
  
  
  0.816
GCA_001552855_03699
Unannotated protein.
  
  
  0.809
GCA_001552855_01434
Unannotated protein.
     
 0.783
GCA_001552855_02860
Unannotated protein.
     
 0.783
GCA_001552855_03701
Unannotated protein.
 
  
  0.761
GCA_001552855_00505
Unannotated protein.
  
 
 0.741
GCA_001552855_00526
Unannotated protein.
  
  
  0.736
GCA_001552855_01371
Unannotated protein.
  
  
  0.725
GCA_001552855_00525
Unannotated protein.
  
  
  0.724
Your Current Organism:
Skermania piniformis
NCBI taxonomy Id: 1223536
Other names: S. piniformis NBRC 15059, Skermania piniformis NBRC 15059
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.