STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAC66240.1Putative ABC transporter permease/ATP-binding protein. (589 aa)    
Predicted Functional Partners:
GAC66239.1
Putative ABC transporter permease/ATP-binding protein.
 
   
0.853
GAC70884.1
Putative ABC transporter permease/ATP-binding protein.
    0.790
GAC68913.1
Putative acetoin utilization protein.
  
  0.703
GAC68429.1
Hypothetical protein.
    
 0.699
GAC69330.1
Hypothetical protein.
    
 0.699
GAC70067.1
Putative ATPase; Belongs to the AAA ATPase family.
    
  0.698
fas
Fatty-acid synthase I.
   
 0.679
GAC70898.1
Peptidase C56 family protein.
   
  0.643
GAC66241.1
Hypothetical protein.
       0.620
arc
Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis.
  
 
  0.580
Your Current Organism:
Gordonia soli
NCBI taxonomy Id: 1223545
Other names: G. soli NBRC 108243, Gordonia soli NBRC 108243
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