STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAC66699.1Hypothetical protein. (392 aa)    
Predicted Functional Partners:
GAC66698.1
Putative LacI family transcriptional regulator.
 
     0.899
idh
Myo-inositol 2-dehydrogenase.
 
    0.811
GAC66700.1
Putative oxidoreductase.
 
  0.784
GAC67174.1
Putative oxidoreductase.
  
  0.730
GAC66702.1
Putative inositol catabolism protein.
 
     0.728
GAC66703.1
Putative oxidoreductase.
 
    0.701
GAC68496.1
Hypothetical protein.
  
 
  0.666
GAC67344.1
Hypothetical protein.
  
     0.653
GAC67259.1
Putative FAD-linked oxidase.
   
  0.637
GAC67449.1
Putative FAD-linked oxidase.
   
  0.637
Your Current Organism:
Gordonia soli
NCBI taxonomy Id: 1223545
Other names: G. soli NBRC 108243, Gordonia soli NBRC 108243
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.