STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
menEo-succinylbenzoate--CoA ligase. (376 aa)    
Predicted Functional Partners:
menB
Naphthoate synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily.
 
  
 0.986
menC
O-succinylbenzoate synthase; Converts 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1- carboxylate (SHCHC) to 2-succinylbenzoate (OSB).
 
 
  0.970
GAC68472.1
Putative non-ribosomal peptide synthetase.
 
0.934
GAC70648.1
Hypothetical protein.
  
 0.930
GAC71012.1
Putative non-ribosomal peptide synthetase.
0.893
GAC66290.1
Hypothetical protein.
0.890
GAC71057.1
Putative non-ribosomal peptide synthetase.
0.889
GAC71062.1
Putative non-ribosomal peptide synthetase.
 
0.889
GAC71063.1
Putative non-ribosomal peptide synthetase.
0.888
GAC66273.1
Putative non-ribosomal peptide synthetase.
 
0.882
Your Current Organism:
Gordonia soli
NCBI taxonomy Id: 1223545
Other names: G. soli NBRC 108243, Gordonia soli NBRC 108243
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