STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFU38990.1Lysophospholipase L1. (443 aa)    
Predicted Functional Partners:
SFU38941.1
Rhamnogalacturonan endolyase.
  0.991
SFU39140.1
alpha-L-rhamnosidase.
  0.974
SFU27526.1
Pectinesterase.
 
  
 0.951
SFU38979.1
Beta-galactosidase/beta-glucuronidase.
 
     0.885
SFU27545.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
  0.868
SFU27519.1
Polygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
  0.861
SFU74941.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
  0.859
SFU39163.1
Glycosyl hydrolases family 43; Belongs to the glycosyl hydrolase 43 family.
     0.853
SFU39064.1
Protein of unknown function, DUF608.
 
 
  0.849
SFU69990.1
Glycosyl hydrolases family 28; Belongs to the glycosyl hydrolase 28 family.
 
  0.841
Your Current Organism:
Pustulibacterium marinum
NCBI taxonomy Id: 1224947
Other names: CCTCC AB2012862, CGMCC 1.12333, Flavobacteriaceae bacterium E403, KCTC 32192, P. marinum, Pustulibacterium marinum Wang et al. 2013, strain E403
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.