STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KLK92640.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (479 aa)    
Predicted Functional Partners:
KLK92486.1
Cobalamin biosynthesis protein CobN; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.748
hemH
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX. Belongs to the ferrochelatase family.
    
 0.639
KLK92642.1
FAD-dependent oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.582
KLK89639.1
Nodulation protein NodZ; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 23 family.
    
  0.562
KLK91809.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.558
KLK92638.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.555
KLK89634.1
SAM-dependent methlyltransferase; SAM-utilizing methyltransferase involved in nod factor synthesis.
  
 
 0.543
KLK94131.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.539
KLK94142.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family.
  
     0.526
KLK92639.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.525
Your Current Organism:
Microvirga vignae
NCBI taxonomy Id: 1225564
Other names: HAMBI 3457, M. vignae, Microvirga sp. BR10192, Microvirga sp. BR10193, Microvirga sp. BR10194, Microvirga sp. BR10195, Microvirga sp. BR10196, Microvirga sp. BR10197, Microvirga sp. BR3296, Microvirga sp. BR3299, Microvirga vignae Radl et al. 2014, strain BR3299
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.