STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NMB1585Transcriptional regulator, MarR family; Identified by similarity to GP:2791909; match to protein family HMM PF01047. (143 aa)    
Predicted Functional Partners:
NMB1586
Hypothetical protein; Identified by Glimmer2; putative.
 
  
 0.955
NMB1565
Hypothetical protein; Identified by Glimmer2; putative.
  
  
 0.759
NMB1564
Conserved hypothetical protein; Identified by similarity to EGAD:91663; match to protein family HMM PF02566.
  
  
 0.730
NMB1853
Hypothetical protein; Identified by Glimmer2; putative.
      
 0.726
NMB1584
3-hydroxyacid dehydrogenase; Identified by similarity to EGAD:155484; match to protein family HMM PF03446.
  
  
 0.719
ntpA
dATP pyrophosphohydrolase; Identified by similarity to EGAD:24131; match to protein family HMM PF00293.
   
  
 0.585
cmk
Cytidylate kinase; Identified by similarity to EGAD:10189; match to protein family HMM PF02224; match to protein family HMM TIGR00017.
   
    0.572
NMB1497
TonB-dependent receptor; Probable receptor, TonB-dependent.
  
    0.525
NMB0470
C4-dicarboxylate transporter; Identified by similarity to EGAD:107946; match to protein family HMM PF00939; match to protein family HMM TIGR00785.
   
    0.462
NMB1994
Putative adhesin/invasin; Identified by similarity to GP:2735093; match to protein family HMM PF03895.
  
     0.446
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.