STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pan1Major anaerobically induced outer membrane protein; Catalyzes the reduction of nitrite to nitric oxide (NO). It could be essential for growth and survival in oxygen-depleted environments; Belongs to the multicopper oxidase family. (390 aa)    
Predicted Functional Partners:
norB
Nitric oxide reductase; Identified by similarity to GP:2584871.
 
 
 0.996
NMB0717
Putative cytochrome; Identified by similarity to EGAD:40915; match to protein family HMM PF00034.
  
 0.952
NMB1452
Conserved hypothetical protein; Identified by similarity to EGAD:90034.
     
  0.900
NMB1624
Hypothetical protein; Identified by Glimmer2; putative.
 
    0.887
NMB1325
Cation transport ATPase, E1-E2 family; Identified by similarity to EGAD:98230; match to protein family HMM PF00122; match to protein family HMM PF00403; match to protein family HMM PF00702; match to protein family HMM TIGR01494; match to protein family HMM TIGR01511; match to protein family HMM TIGR01525.
 
  
 0.663
nosD
Copper ABC transporter, periplasmic copper-binding protein; Identified by similarity to EGAD:35473; match to protein family HMM PF05048.
 
  
 0.630
NMB1677
Cytochrome c5; Identified by similarity to GP:2231996; match to protein family HMM PF00034.
   
   0.613
nosF
Copper ABC transporter, ATP-binding protein; Identified by similarity to EGAD:35474; match to protein family HMM PF00005.
   
  
 0.593
nuoC
NADH dehydrogenase I, C subunit; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient; Belongs to the complex I 30 kDa subunit family.
   
    0.572
NMB0581
Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone.
   
  
 0.562
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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