STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dpnCType II restriction enzyme DpnI; Identified by similarity to EGAD:6380; match to protein family HMM PF06044. (267 aa)    
Predicted Functional Partners:
NMB1895
DNA adenine methylase, truncation; Identified by similarity to EGAD:28856.
  
    0.784
NMB1894
leucyl-tRNA synthetase, truncation; Identified by similarity to EGAD:108383.
       0.776
NMB1040
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.589
leuS
leucyl-tRNA synthetase; Identified by similarity to EGAD:9061; match to protein family HMM PF00133; match to protein family HMM TIGR00396.
  
  
 0.549
NMB0313
Conserved hypothetical protein; Identified by similarity to GP:3523136; match to protein family HMM PF04575; match to protein family HMM PF07719.
  
     0.545
NMB1828
Conserved hypothetical protein; Identified by similarity to GP:2738251; match to protein family HMM PF00756.
  
    0.535
NMB0266
Conserved hypothetical protein; Identified by similarity to EGAD:107494; match to protein family HMM PF03413.
  
     0.529
NMB1531
Conserved hypothetical protein; Identified by similarity to EGAD:29187.
  
    0.497
NMB1580
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.471
NMB1645
Hypothetical protein; Identified by Glimmer2; putative.
  
     0.462
Your Current Organism:
Neisseria meningitidis
NCBI taxonomy Id: 122586
Other names: N. meningitidis MC58, Neisseria meningitidis MC58, Neisseria meningitidis serogroup B strain MC58
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.