STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFQ46661.1Glycosyl transferase family 2. (268 aa)    
Predicted Functional Partners:
SFQ46675.1
Glycosyl transferase family 2.
 
    
0.793
SFQ46763.1
Glycosyl transferase family 2; Manually curated.
 
     0.785
SFQ84310.1
Glycosyl transferase family 2.
  
     0.756
SFQ83645.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.747
SFP83770.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.738
SFQ83628.1
Glycosyltransferase involved in cell wall bisynthesis.
  
  
  0.662
SFQ46690.1
Glycosyltransferase involved in cell wall bisynthesis; Manually curated.
 
    
0.624
fcl
GDP-L-fucose synthase; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction.
  
 
  0.620
SFQ84316.1
Glycosyl transferase family 2.
  
     0.614
gmd
GDPmannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
 
 
  0.502
Your Current Organism:
Siccationidurans arizonensis
NCBI taxonomy Id: 1227077
Other names: DSM 17870, Hymenobacter arizonensis, Hymenobacter arizonensis Reddy and Garcia-Pichel 2013, Hymenobacter sp. OR362-8, JCM 13504, S. arizonensis, strain OR362-8
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