STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFT85312.1Type VI secretion system secreted protein Hcp; Identified by sequence similarity; putative. (161 aa)    
Predicted Functional Partners:
AFT85310.1
Type VI secretion system protein; Identified by sequence similarity; putative.
 
  
 0.926
AFT85317.1
Type VI secretion system protein ImpC; Identified by sequence similarity; putative.
 
 
 0.914
AFT85316.1
Type VI secretion system protein ImpB; Identified by sequence similarity; putative.
 
 
 0.911
AFT89632.1
Type VI secretion system secreted protein Hcp; Identified by sequence similarity; putative.
  
  
0.911
AFT85314.1
Type VI secretion system protein ImpK; Identified by sequence similarity; putative.
 
  
 0.891
AFT85315.1
Type VI secretion system protein ImpJ; Identified by sequence similarity; putative.
 
  
 0.876
AFT87815.1
Rhs element Vgr protein; Identified by sequence similarity; putative.
 
  
 0.869
AFT85318.1
Rhs element Vgr protein; Identified by sequence similarity; putative.
 
  
 0.869
AFT85680.1
Hypothetical protein.
 
  
 0.869
AFT87933.1
Rhs element Vgr protein; Identified by sequence similarity; putative.
 
  
 0.868
Your Current Organism:
Paraburkholderia phenoliruptrix
NCBI taxonomy Id: 1229205
Other names: Burkholderia phenoliruptrix BR3459a, P. phenoliruptrix BR3459a, Paraburkholderia phenoliruptrix BR3459a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.