STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFT89631.1Type VI secretion system protein ImpC; Identified by sequence similarity; putative. (496 aa)    
Predicted Functional Partners:
AFT89630.1
Type VI secretion system protein ImpB; Identified by sequence similarity; putative.
 
 0.998
AFT89632.1
Type VI secretion system secreted protein Hcp; Identified by sequence similarity; putative.
 
 
 0.973
AFT85316.1
Type VI secretion system protein ImpB; Identified by sequence similarity; putative.
 
 
 0.970
AFT89626.1
Type VI secretion system protein ImpK; Identified by sequence similarity; putative.
 
  
 0.931
AFT89633.1
Type VI secretion system protein ImpF; Identified by sequence similarity; putative.
 
  
 0.924
AFT89634.1
Type VI secretion system protein ImpG; Identified by sequence similarity; putative.
 
  
 0.923
AFT85314.1
Type VI secretion system protein ImpK; Identified by sequence similarity; putative.
 
  
 0.910
AFT89636.1
Type VI secretion system protein VasG; Identified by sequence similarity; putative; Belongs to the ClpA/ClpB family.
 
 
 0.907
AFT89635.1
Type VI secretion system protein ImpH; Identified by sequence similarity; putative.
 
  
 0.902
AFT89637.1
Type VI secretion system protein ImpA; Identified by sequence similarity; putative.
 
  
 0.899
Your Current Organism:
Paraburkholderia phenoliruptrix
NCBI taxonomy Id: 1229205
Other names: Burkholderia phenoliruptrix BR3459a, P. phenoliruptrix BR3459a, Paraburkholderia phenoliruptrix BR3459a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.