STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
D791_01966Putative sterol carrier protein. (107 aa)    
Predicted Functional Partners:
D791_00987
Hypothetical protein.
  
     0.711
sohB
Putative protease sohB.
       0.612
mucD_3
Putative periplasmic serine endoprotease DegP-like precursor; Overlaps CDS with the same product name.
  
     0.588
D791_02376
Hypothetical protein; Belongs to the UPF0149 family.
  
     0.557
D791_00933
Periplasmic chaperone.
  
     0.555
prpE
Bis(5'-nucleosyl)-tetraphosphatase prpE.
  
     0.522
D791_01968
Putative DNA-binding transcriptional regulator.
 
     0.500
ybiS
Putative L,D-transpeptidase YbiS precursor.
 
     0.500
D791_02975
Hypothetical protein.
  
     0.452
D791_03306
Protein of unknown function (DUF2782).
  
     0.441
Your Current Organism:
Nitrincola nitratireducens
NCBI taxonomy Id: 1229521
Other names: JCM 18788, MTCC 11628, N. nitratireducens, Nitrincola sp. AK23, Nitrincola sp. AK28, strain AK23
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.