STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_14587Uncharacterized protein. (465 aa)    
Predicted Functional Partners:
PFICI_01559
Nsp1_C domain-containing protein.
   
0.970
PFICI_11417
Uncharacterized protein.
   
0.865
PFICI_06448
Uncharacterized protein.
   
 0.857
PFICI_04825
Uncharacterized protein.
   
 0.857
PFICI_12167
Uncharacterized protein.
   
 0.856
PFICI_01949
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
   
 0.856
PFICI_13768
Nup54 domain-containing protein.
   
 0.852
PFICI_14143
Protein transport protein sec-13; Belongs to the WD repeat SEC13 family.
    
 0.850
PFICI_04517
Uncharacterized protein; Belongs to the WD repeat SEC13 family.
   
 0.849
PFICI_14486
ELYS domain-containing protein.
   
 0.821
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.