STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_12578Response regulatory domain-containing protein. (599 aa)    
Predicted Functional Partners:
PFICI_02951
Elongation factor 1-alpha; This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 0.976
PFICI_13883
WD_REPEATS_REGION domain-containing protein.
   
 0.964
PFICI_07861
Uncharacterized protein.
    
 0.962
PFICI_07747
Protein kinase gsk3; Belongs to the protein kinase superfamily.
    
 0.961
PFICI_00312
Protein kinase domain-containing protein.
    
 0.961
PFICI_08946
CS domain-containing protein.
   
 0.960
PFICI_08988
Histone deacetylase; Responsible for the deacetylation of lysine residues on the N-terminal part of the core histones (H2A, H2B, H3 and H4). Histone deacetylation gives a tag for epigenetic repression and plays an important role in transcriptional regulation, cell cycle progression and developmental events.
    
 0.959
PFICI_04735
Hist_deacetyl domain-containing protein.
    
 0.959
PFICI_07290
Target of rapamycin complex subunit LST8.
     
 0.957
PFICI_11325
HPt domain-containing protein.
   
 
 0.943
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
Server load: low (28%) [HD]