STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_13155MIT domain-containing protein. (1405 aa)    
Predicted Functional Partners:
PFICI_07267
60S ribosomal protein L5.
   
 
 0.889
PFICI_10935
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.884
PFICI_12961
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.880
PFICI_12680
Uncharacterized protein.
  
 
 0.877
PFICI_06296
CTP synthase; Catalyzes the ATP-dependent amination of UTP to CTP with either L-glutamine or ammonia as the source of nitrogen.
  
 
 0.833
PFICI_05867
60S ribosomal protein L7.
    
 
 0.832
PFICI_06011
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
   
 
 0.829
GUF1
Translation factor GUF1, mitochondrial; Promotes mitochondrial protein synthesis. May act as a fidelity factor of the translation reaction, by catalyzing a one-codon backward translocation of tRNAs on improperly translocated ribosomes. Binds to mitochondrial ribosomes in a GTP-dependent manner.
 
      0.819
PFICI_13827
Ribosomal protein S16.
  
 
 0.818
PFICI_05346
Uncharacterized protein.
  
 
 0.818
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.