STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_12545Acyl_transf_3 domain-containing protein. (435 aa)    
Predicted Functional Partners:
PFICI_08725
Transcription initiation factor TFIID subunit 10; Functions as a component of the DNA-binding general transcription factor complex TFIID and the transcription regulatory histone acetylation (HAT) complexes SAGA and SLIK. Binding of TFIID to a promoter (with or without TATA element) is the initial step in preinitiation complex (PIC) formation. TFIID plays a key role in the regulation of gene expression by RNA polymerase II through different activities such as transcription activator interaction, core promoter recognition and selectivity, TFIIA and TFIIB interaction, chromatin modificati [...]
   
 0.954
PFICI_12338
TFIID_20kDa domain-containing protein.
    
 0.951
PFICI_13190
Uncharacterized protein.
    
 0.951
PFICI_11003
Uncharacterized protein.
    
 0.951
PFICI_11438
Uncharacterized protein.
    
 0.951
PFICI_09600
TAF domain-containing protein.
    
 0.951
PFICI_06947
Uncharacterized protein.
    
 0.951
PFICI_06934
Uncharacterized protein.
   
 0.951
PFICI_06922
DUF3591 domain-containing protein.
    
 0.948
PFICI_10296
TATA-box-binding protein.
   
 0.947
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.