STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_12175Uncharacterized protein. (265 aa)    
Predicted Functional Partners:
PFICI_02229
Uncharacterized protein.
   
 
 0.919
PFICI_14677
Uncharacterized protein.
     
  0.900
PFICI_03393
Uncharacterized protein.
     
  0.900
PFICI_13998
MR_MLE domain-containing protein.
  
 
 0.712
PFICI_13763
Citrate synthase; Belongs to the citrate synthase family.
  
 0.624
PFICI_14117
Citrate synthase; Belongs to the citrate synthase family.
  
 0.624
PFICI_09705
Citrate synthase; Belongs to the citrate synthase family.
  
 0.624
PFICI_11410
Citrate synthase; Belongs to the citrate synthase family.
  
 0.624
PFICI_07529
Uncharacterized protein.
  
 
 0.622
PFICI_13984
Malate synthase; Belongs to the malate synthase family.
  
 0.556
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.