STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_09372Cofilin; Belongs to the actin-binding proteins ADF family. (152 aa)    
Predicted Functional Partners:
PFICI_07742
Actin.
   
 
 0.948
PFICI_09371
Heat shock protein 60; Belongs to the chaperonin (HSP60) family.
 
 
  
 0.909
PFICI_11908
Uncharacterized protein.
 
  
 
 0.889
PFICI_07250
WD_REPEATS_REGION domain-containing protein.
   
 
 0.884
PFICI_06568
Actin-like protein; Belongs to the actin family.
   
 
 0.880
PFICI_15342
CAP_N domain-containing protein.
   
 0.828
PFICI_04891
Adenylyl cyclase-associated protein; Belongs to the CAP family.
   
 0.828
PFICI_03686
Actin-related protein 3; Belongs to the actin family.
   
 
 0.822
PFICI_05969
Actin-related protein 2; ATP-binding component of the Arp2/3 complex, a multiprotein complex that mediates actin polymerization upon stimulation by nucleation-promoting factor (NPF). The Arp2/3 complex mediates the formation of branched actin networks in the cytoplasm, providing the force for cell motility. Seems to contact the pointed end of the daughter actin filament.
   
 
 0.815
PFICI_06928
Actin-related protein 4; Belongs to the actin family.
   
 
 0.815
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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