STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_08366Uncharacterized protein. (306 aa)    
Predicted Functional Partners:
PFICI_13748
WD_REPEATS_REGION domain-containing protein.
   
 0.784
PFICI_01961
C2H2-type domain-containing protein.
   
 0.721
PFICI_13067
Pre-mRNA-splicing factor prp1.
   
 0.669
PFICI_08821
Uncharacterized protein.
   
 0.668
PFICI_10901
Branchpoint-bridging protein.
   
 0.662
PFICI_01498
Uncharacterized protein.
   
 0.650
PFICI_03061
Uncharacterized protein.
   
 0.646
PFICI_12701
U-box domain-containing protein.
   
 0.645
PFICI_07816
MFAP1 domain-containing protein.
   
  0.639
PFICI_01849
RED_N domain-containing protein.
   
  0.638
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.