STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_06584Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family. (384 aa)    
Predicted Functional Partners:
PFICI_04196
Porphobilinogen deaminase.
 
 0.999
PFICI_03548
HEM4 domain-containing protein.
  
 0.984
PFICI_02734
5-aminolevulinate synthase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family.
    
 0.982
PFICI_00718
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 0.958
PFICI_13777
Uncharacterized protein.
 
  
 0.852
PFICI_01873
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 
 0.828
PFICI_04678
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
 
  
 0.773
PFICI_09318
Chorismate synthase.
  
  
 0.733
PFICI_03904
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 0.711
PFICI_11126
tRNA-synt_1e domain-containing protein.
     
 0.699
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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