STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_04845Isopentenyl-diphosphate Delta-isomerase. (254 aa)    
Predicted Functional Partners:
PFICI_08852
Diphosphomevalonate decarboxylase; Belongs to the diphosphomevalonate decarboxylase family.
  
 
 0.994
PFICI_08307
Farnesyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
 
 
 0.989
PFICI_06391
Geranylgeranyl pyrophosphate synthase; Belongs to the FPP/GGPP synthase family.
  
 
 0.976
PFICI_04283
Uncharacterized protein.
   
  
 0.873
PFICI_11972
Uncharacterized protein.
  
 
 0.843
PFICI_07703
Terpene cyclase/mutase family member; Belongs to the terpene cyclase/mutase family.
  
 
 0.834
PFICI_08232
Uncharacterized protein.
  
 
 0.834
PFICI_06798
Squalene synthase.
 
  
 0.834
PFICI_13524
3-hydroxy-3-methylglutaryl coenzyme A reductase.
 
  
 0.814
PFICI_08233
SQHop_cyclase_N domain-containing protein.
  
 
 0.807
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.