STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_04638Uncharacterized protein. (339 aa)    
Predicted Functional Partners:
PFICI_12971
Protein kinase domain-containing protein.
   
 
 0.759
PFICI_07903
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
      
 0.611
PFICI_05968
Serine/threonine-protein kinase SSN3.
      
 0.563
PFICI_14096
Uncharacterized protein.
 
      0.487
PFICI_04637
Tr-type G domain-containing protein.
 
      0.477
PFICI_10750
Cyclin_C_2 domain-containing protein.
      
 0.476
PFICI_07488
Uncharacterized protein.
      
 0.410
PFICI_05205
Electron transfer flavoprotein subunit beta.
 
      0.409
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.