STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PFICI_00668Uncharacterized protein. (436 aa)    
Predicted Functional Partners:
PFICI_14193
Uncharacterized protein.
   
 0.918
PFICI_12796
Uncharacterized protein.
    
 0.887
PFICI_08692
Uncharacterized protein.
    
 0.865
PFICI_06637
Uncharacterized protein.
    
 0.860
PFICI_08105
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.853
PFICI_02134
Trafficking protein particle complex subunit BET3.
    
 0.853
PFICI_07813
Trafficking protein particle complex subunit; Plays a key role in the late stages of endoplasmic reticulum to Golgi traffic.
    
 0.842
PFICI_00579
Trafficking protein particle complex subunit; Belongs to the TRAPP small subunits family.
    
 0.842
PFICI_08023
Uncharacterized protein.
    
 0.801
PFICI_11027
Uncharacterized protein.
   
 0.785
Your Current Organism:
Pestalotiopsis fici
NCBI taxonomy Id: 1229662
Other names: P. fici W106-1, Pestalotiopsis fici W106-1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.