STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCM63645.1Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (89 aa)    
Predicted Functional Partners:
relE
Toxin RelE.
 
 
 
 0.966
CCM64587.1
Plasmid stabilization system.
 
 
 
 0.966
CCM63646.1
Hypothetical protein; No homology to any previously reported sequences.
   
 
 0.854
mazF-3
Putative toxin MazF2; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.682
CCM63643.1
Hypothetical protein; No homology to any previously reported sequences.
       0.536
CCM63644.1
Hypothetical protein; No homology to any previously reported sequences.
       0.536
CCM65457.1
MOSC domain protein beta barrel domain protein.
  
     0.461
CCM63166.1
Putative Radical SAM domain protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.445
CCM63784.1
Putative Transcriptional regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.418
CCM62199.1
Putative mRNA interferase MazF3; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology.
  
     0.411
Your Current Organism:
Microthrix parvicella
NCBI taxonomy Id: 1229780
Other names: C. Microthrix parvicella RN1, Candidatus Microthrix parvicella RN1, Candidatus Microthrix parvicella str. RN1, Candidatus Microthrix parvicella strain RN1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.