STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C461_01277Hypothetical protein. (223 aa)    
Predicted Functional Partners:
C461_01272
Transcriptional regulator, CopG family protein; COG3609 Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain.
     
 0.559
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
     
 0.552
C461_01282
Hypothetical protein.
       0.485
smc
Chromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family.
       0.444
C461_01292
Chromosome segregation and condensation protein ScpA.
       0.444
Your Current Organism:
Halorubrum aidingense
NCBI taxonomy Id: 1230454
Other names: H. aidingense JCM 13560, Halorubrum aidingense JCM 13560, Halorubrum sp. 31-hong
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.