STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OCGS_0350ABC transporter, permease protein. (279 aa)    
Predicted Functional Partners:
OCGS_0280
ABC transporter, ATP-binding protein.
 
 0.944
OCGS_1319
Nitroreductase family protein.
  
  
 0.800
OCGS_2835
Nitroreductase.
  
  
 0.798
OCGS_1062
Putative ATP/GTP binding protein NosF.
  
 
 0.707
OCGS_1324
Abortive infection protein.
   
  
 0.677
OCGS_1366
Putative cell surface polysaccharide export ABC-2 transporter permease protein.
    
  0.675
OCGS_2141
Dipeptide transport ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.643
OCGS_2142
ABC di/oligopeptide transporter, ATPase subunit; Belongs to the ABC transporter superfamily.
  
 
 0.643
OCGS_0916
ABC transporter, inner membrane subunit.
    
  0.631
OCGS_0348
GcrA cell cycle regulator.
       0.582
Your Current Organism:
Oceaniovalibus guishaninsula
NCBI taxonomy Id: 1231392
Other names: O. guishaninsula JLT2003, Oceaniovalibus guishaninsula JLT2003
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