STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GAN55274.1Hypothetical protein. (412 aa)    
Predicted Functional Partners:
GAN55275.1
Phage-related baseplate assembly protein.
  
    0.777
GAN55272.1
Hypothetical protein.
       0.773
GAN55273.1
Hypothetical protein.
       0.773
GAN55276.1
Hypothetical protein.
       0.773
GAN55270.1
Hypothetical protein.
       0.568
GAN55271.1
Hypothetical protein.
       0.568
GAN55277.1
Hypothetical protein.
       0.535
GAN55278.1
Hypothetical protein.
       0.535
GAN55279.1
Hypothetical protein.
       0.490
GAN55280.1
Hypothetical protein.
       0.445
Your Current Organism:
Tanticharoenia sakaeratensis
NCBI taxonomy Id: 1231623
Other names: T. sakaeratensis NBRC 103193, Tanticharoenia sakaeratensis BCC 15772, Tanticharoenia sakaeratensis NBRC 103193
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.