STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001368795_00142Unannotated protein. (98 aa)    
Predicted Functional Partners:
GCA_001368795_00143
Unannotated protein.
     0.994
GCA_001368795_00144
Unannotated protein.
       0.797
GCA_001368795_00145
Unannotated protein.
       0.733
GCA_001368795_03684
Unannotated protein.
 
     0.581
GCA_001368795_00141
Unannotated protein.
       0.510
GCA_001368795_01891
Unannotated protein.
 
     0.500
GCA_001368795_01894
Unannotated protein.
 
     0.479
GCA_001368795_00152
Unannotated protein.
 
    0.456
GCA_001368795_00615
Unannotated protein.
 
    0.455
GCA_001368795_01893
Unannotated protein.
  
     0.455
Your Current Organism:
Paenibacillus ihuae
NCBI taxonomy Id: 1232431
Other names: CSUR P892, P. ihuae, Paenibacillus sp. GD6, strain GD6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.