STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001368795_02698Unannotated protein. (476 aa)    
Predicted Functional Partners:
GCA_001368795_00877
Unannotated protein.
 0.981
GCA_001368795_00875
Unannotated protein.
  
 0.972
GCA_001368795_02699
Unannotated protein.
  0.970
GCA_001368795_02700
Unannotated protein.
 
 
   0.969
GCA_001368795_00876
Unannotated protein.
  
0.961
GCA_001368795_05686
Unannotated protein.
 
 
0.943
GCA_001368795_02641
Unannotated protein.
 
0.940
GCA_001368795_00873
Unannotated protein.
 
 0.900
GCA_001368795_03233
Unannotated protein.
 0.887
GCA_001368795_05081
Unannotated protein.
  0.868
Your Current Organism:
Paenibacillus ihuae
NCBI taxonomy Id: 1232431
Other names: CSUR P892, P. ihuae, Paenibacillus sp. GD6, strain GD6
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.