STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C725_1809Enoyl-CoA hydratase. (265 aa)    
Predicted Functional Partners:
C725_0990
3-hydroxybutyryl-CoA dehydrogenase.
 0.996
C725_2432
acetyl-CoA acetyltransferase.
 
 
  0.963
C725_2611
Multi-sensor hybrid histidine kinase.
    
 0.962
C725_2653
PAS/PAC sensor hybrid histidine kinase.
    
  0.938
C725_2471
3-hydroxyisobutyryl-CoA hydrolase.
 
 
0.935
C725_1791
Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.
0.910
C725_2054
Enoyl-CoA hydratase.
0.906
C725_0489
Isovaleryl-CoA dehydrogenase.
 
 
  0.905
C725_0488
Methylcrotonyl-CoA carboxylase biotin-containing subunit.
 
  0.883
C725_1748
Enoyl-CoA hydratase.
  
  
 
0.883
Your Current Organism:
Pacificimonas flava
NCBI taxonomy Id: 1234595
Other names: CGMCC 1.12401, LMG 27364, LMG:27364, P. flava, Pacificamonas flava, Pacificimonas flava corrig. Liu et al. 2016, alpha proteobacterium JLT2015, strain JLT2015
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