STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C808_00933Hypothetical protein. (615 aa)    
Predicted Functional Partners:
glmS
Glutamine-fructose-6-phosphate transaminase (isomerizing); Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
       0.761
C808_00935
Hypothetical protein.
 
     0.568
C808_03874
Hypothetical protein.
  
     0.506
C808_02253
Hypothetical protein.
  
     0.497
C808_00932
UDP-galactopyranose mutase.
       0.471
C808_00931
Hypothetical protein.
       0.451
C808_00137
Hypothetical protein.
 
     0.440
C808_05286
Hypothetical protein.
  
     0.435
C808_04057
Hypothetical protein.
  
     0.424
C808_00936
Hypothetical protein.
  
    0.410
Your Current Organism:
Lachnospiraceae bacterium M181
NCBI taxonomy Id: 1235792
Other names: L. bacterium M18-1, Lachnospiraceae bacterium M18-1
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