Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AGI85856.1 | AGI85857.2 | MMALV_11230 | MMALV_11240 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | Hypothetical protein. | 0.448 |
AGI85856.1 | AGI85859.1 | MMALV_11230 | MMALV_11260 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | 3-methylornithyl-N6-L-lysine dehydrogenase. | 0.448 |
AGI85856.1 | AGI85860.1 | MMALV_11230 | MMALV_11270 | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | 3-methylornithine--L-lysine ligase. | 0.457 |
AGI85857.2 | AGI85856.1 | MMALV_11240 | MMALV_11230 | Hypothetical protein. | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | 0.448 |
AGI85857.2 | AGI85859.1 | MMALV_11240 | MMALV_11260 | Hypothetical protein. | 3-methylornithyl-N6-L-lysine dehydrogenase. | 0.775 |
AGI85857.2 | AGI85860.1 | MMALV_11240 | MMALV_11270 | Hypothetical protein. | 3-methylornithine--L-lysine ligase. | 0.863 |
AGI85857.2 | AGI85861.1 | MMALV_11240 | MMALV_11280 | Hypothetical protein. | Pyrrolysyl-tRNA synthetase. | 0.538 |
AGI85859.1 | AGI85856.1 | MMALV_11260 | MMALV_11230 | 3-methylornithyl-N6-L-lysine dehydrogenase. | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | 0.448 |
AGI85859.1 | AGI85857.2 | MMALV_11260 | MMALV_11240 | 3-methylornithyl-N6-L-lysine dehydrogenase. | Hypothetical protein. | 0.775 |
AGI85859.1 | AGI85860.1 | MMALV_11260 | MMALV_11270 | 3-methylornithyl-N6-L-lysine dehydrogenase. | 3-methylornithine--L-lysine ligase. | 0.981 |
AGI85859.1 | AGI85861.1 | MMALV_11260 | MMALV_11280 | 3-methylornithyl-N6-L-lysine dehydrogenase. | Pyrrolysyl-tRNA synthetase. | 0.647 |
AGI85860.1 | AGI85856.1 | MMALV_11270 | MMALV_11230 | 3-methylornithine--L-lysine ligase. | Cold-shock DEAD-box protein A; Belongs to the DEAD box helicase family. | 0.457 |
AGI85860.1 | AGI85857.2 | MMALV_11270 | MMALV_11240 | 3-methylornithine--L-lysine ligase. | Hypothetical protein. | 0.863 |
AGI85860.1 | AGI85859.1 | MMALV_11270 | MMALV_11260 | 3-methylornithine--L-lysine ligase. | 3-methylornithyl-N6-L-lysine dehydrogenase. | 0.981 |
AGI85860.1 | AGI85861.1 | MMALV_11270 | MMALV_11280 | 3-methylornithine--L-lysine ligase. | Pyrrolysyl-tRNA synthetase. | 0.674 |
AGI85861.1 | AGI85857.2 | MMALV_11280 | MMALV_11240 | Pyrrolysyl-tRNA synthetase. | Hypothetical protein. | 0.538 |
AGI85861.1 | AGI85859.1 | MMALV_11280 | MMALV_11260 | Pyrrolysyl-tRNA synthetase. | 3-methylornithyl-N6-L-lysine dehydrogenase. | 0.647 |
AGI85861.1 | AGI85860.1 | MMALV_11280 | MMALV_11270 | Pyrrolysyl-tRNA synthetase. | 3-methylornithine--L-lysine ligase. | 0.674 |