STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310955_00779Unannotated protein. (339 aa)    
Predicted Functional Partners:
GCA_001310955_03079
Unannotated protein.
    
 
 0.922
GCA_001310955_02554
Unannotated protein.
    
   0.674
GCA_001310955_02928
Unannotated protein.
    
   0.568
GCA_001310955_03987
Unannotated protein.
    
   0.568
GCA_001310955_00778
Unannotated protein.
   
 
 0.563
GCA_001310955_03692
Unannotated protein.
    
   0.560
GCA_001310955_03693
Unannotated protein.
    
   0.560
GCA_001310955_01271
Unannotated protein.
 
 
 0.554
GCA_001310955_00113
Unannotated protein.
    
 0.483
GCA_001310955_00086
Unannotated protein.
   
 0.478
Your Current Organism:
Marinifilum fragile
NCBI taxonomy Id: 1236979
Other names: M. fragile JCM 15579, Marinifilum fragile JCM 15579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.