STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310955_03342Unannotated protein. (204 aa)    
Predicted Functional Partners:
GCA_001310955_03344
Unannotated protein.
 
  
 0.800
GCA_001310955_03343
Unannotated protein.
 
    0.645
GCA_001310955_03821
Unannotated protein.
 
   
 0.637
GCA_001310955_02328
Unannotated protein.
 
   
 0.538
GCA_001310955_03913
Unannotated protein.
  
   
 0.536
GCA_001310955_02980
Unannotated protein.
 
     0.531
GCA_001310955_01185
Unannotated protein.
 
  
  0.529
GCA_001310955_00214
Unannotated protein.
  
     0.510
GCA_001310955_02149
Unannotated protein.
  
  
 0.498
GCA_001310955_01338
Unannotated protein.
  
   
 0.485
Your Current Organism:
Marinifilum fragile
NCBI taxonomy Id: 1236979
Other names: M. fragile JCM 15579, Marinifilum fragile JCM 15579
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.