STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001310955_04154Unannotated protein. (106 aa)    
Predicted Functional Partners:
GCA_001310955_01199
Unannotated protein.
  
  0.994
GCA_001310955_01057
Unannotated protein.
  
 0.987
GCA_001310955_00177
Unannotated protein.
 
  
 0.944
GCA_001310955_02531
Unannotated protein.
 
   
  0.882
GCA_001310955_00485
Unannotated protein.
 
 
 0.875
GCA_001310955_00910
Unannotated protein.
 
      0.858
GCA_001310955_04155
Unannotated protein.
 
     0.830
GCA_001310955_00535
Unannotated protein.
 
  
  0.753
GCA_001310955_01268
Unannotated protein.
    
  0.582
GCA_001310955_02502
Unannotated protein.
    
  0.582
Your Current Organism:
Marinifilum fragile
NCBI taxonomy Id: 1236979
Other names: M. fragile JCM 15579, Marinifilum fragile JCM 15579
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.