STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_01525Hypothetical protein. (371 aa)    
Predicted Functional Partners:
C900_02708
Hypothetical protein.
  
 
 0.840
C900_00349
Chemotaxis protein methyltransferase CheR.
  
  
 0.810
C900_02896
Chemotaxis protein methyltransferase CheR.
  
  
 0.807
C900_01524
Cysteine desulfurase.
       0.773
C900_02215
Hypothetical protein.
 
     0.726
C900_01612
Sensor histidine kinase/response regulator fusion protein.
 
  
 0.683
C900_04688
Signal transduction histidine kinase CheA.
  
  
 0.669
C900_01536
Hypothetical protein.
  
 
 0.661
C900_01522
Hypothetical protein.
  
    0.651
C900_04683
Hypothetical protein.
  
  
 0.650
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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