STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C900_05238UPF0337 protein yjbJ; Belongs to the UPF0337 (CsbD) family. (58 aa)    
Predicted Functional Partners:
C900_05849
Hypothetical protein.
 
    0.937
C900_05246
Putative general stress protein 26.
  
    0.722
C900_01343
Putative general stress protein 26.
  
    0.688
C900_05237
Hypothetical protein.
  
    0.681
C900_02151
Transport-associated protein.
  
  
 0.673
C900_03065
Osmotically inducible protein Y precursor.
  
  
 0.673
C900_05336
Hypothetical protein.
  
    0.651
C900_01333
Dodecin.
   
    0.617
C900_05245
Organic hydroperoxide resistance protein.
  
  
 0.615
C900_04918
Cell division inhibitor.
   
    0.605
Your Current Organism:
Fulvivirga imtechensis
NCBI taxonomy Id: 1237149
Other names: F. imtechensis AK7, Fulvivirga imtechensis AK7, Fulvivirga sp. AK7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.