STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C882_0268Hypothetical protein. (168 aa)    
Predicted Functional Partners:
C882_0267
Band 7 protein.
 
     0.870
C882_0263
Hypothetical protein.
 
     0.811
C882_0248
permease/ATP-binding protein.
 
     0.774
C882_1525
Hypothetical protein.
 
     0.544
C882_0270
Malonyl CoA-acyl carrier protein transacylase.
 
     0.506
C882_0273
Long-chain-fatty-acid--CoA ligase.
 
     0.506
C882_3337
Methyltransferase FkbM family.
  
     0.417
C882_2013
Methyl-accepting chemotaxis protein.
      
 0.414
Your Current Organism:
Caenispirillum salinarum
NCBI taxonomy Id: 1238182
Other names: C. salinarum AK4, Caenispirillum salinarum AK4, Caenispirillum salinarum JCM 17360, Caenispirillum salinarum MTCC 10963, Caenispirillum sp. AK4
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