STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_02562Uncharacterized protein. (571 aa)    
Predicted Functional Partners:
PSACC_03664
KRR1 small subunit processome component; Required for 40S ribosome biogenesis. Involved in nucleolar processing of pre-18S ribosomal RNA and ribosome assembly.
   
 0.999
PSACC_03586
40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family.
    
 0.999
PSACC_03490
WD_REPEATS_REGION domain-containing protein.
   
 0.999
PSACC_03049
U3 small nucleolar RNA-associated protein 11; Involved in nucleolar processing of pre-18S ribosomal RNA.
   
 0.999
PSACC_02868
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 0.999
PSACC_02762
PINc domain-containing protein.
   
 0.999
PSACC_02641
Uncharacterized protein.
   
 0.999
PSACC_02606
Uncharacterized protein; Belongs to the DEAD box helicase family.
  
 0.999
PSACC_02184
Uncharacterized protein.
   
 0.999
PSACC_01792
WD_REPEATS_REGION domain-containing protein.
   
  0.999
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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