STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PSACC_00787Uncharacterized protein. (514 aa)    
Predicted Functional Partners:
PSACC_03575
Uncharacterized protein.
    
 0.637
PSACC_03435
Homeobox domain-containing protein.
    
 0.597
PSACC_01649
Homeobox domain-containing protein.
    
 0.597
PSACC_00553
Homeobox domain-containing protein.
    
 0.597
PSACC_02699
Tata-Box binding protein YtbP.
    
 0.586
PSACC_03328
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
  0.575
PSACC_03107
Uncharacterized protein.
    
 0.569
PSACC_03329
Histone H3; Belongs to the histone H3 family.
    
 0.552
PSACC_01786
Histone H3; Belongs to the histone H3 family.
    
 0.552
PSACC_02878
Transcription factor.
    
 
 0.548
Your Current Organism:
Paramicrosporidium saccamoebae
NCBI taxonomy Id: 1246581
Other names: KSL3, P. saccamoebae, Paramicrosporidium saccamoebae Corsaro et al., 2014, fungal sp. KSL3
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